[Pw_forum] example09 segfault - ramtns used but not allocated in dynmatrix.f90
Goranka Bilalbegovic
gbilalbegovic at gmail.com
Wed Jan 11 13:23:42 CET 2012
On Mon, Dec 12, 2011 at 11:49 AM, Paolo Giannozzi <giannozz at democritos.it>wrote:
> On Mon, 2011-12-12 at 10:02 +0100, Jean-Roch Huntzinger wrote:
>
> > The attached patch solves a segfault in example09
> > [...] Should I file a bug report ?
>
> too late: it was fixed a few days ago. Thank you anyway!
>
> http://qe-forge.org/scm/viewvc.php?view=rev&root=q-e&sortby=date&revision=8244
>
>
Hello,
I have applied this correction in:
http://qe-forge.org/scm/viewvc.php?view=rev&root=q-e&sortby=date&revision=8244
I also replaced the routine set_asr in dynmat.f90 (attached in:
http://www.democritos.it/pipermail/pw_forum/2011-December/022706.html)
However, the CH4 part of example 9 from 4.3.2, compiled with ifort 11.1, on
the Linux cluster, still does not work (both with asr ='simple' and
'zero-dim').
Error is:
----------
0 - MPI_BARRIER : Null communicator
Exit code -3 signaled from (host)
Killing remote processes...[0] [] Aborting Program!
Abort signaled by rank 0: Aborting program !
forrtl: error (69): process interrupted (SIGINT)
Image PC Routine Line Source
libpthread.so.0 00002ADEFF3158FB Unknown Unknown Unknown
libmpich.so.1.0 00002ADEFEA615A0 Unknown Unknown Unknown
libmpich.so.1.0 00002ADEFEA60E36 Unknown Unknown Unknown
libmpich.so.1.0 00002ADEFEA56371 Unknown Unknown Unknown
libmpich.so.1.0 00002ADEFEA55B40 Unknown Unknown Unknown
libmpich.so.1.0 00002ADEFEA55718 Unknown Unknown Unknown
libmpich.so.1.0 00002ADEFEA10AE4 Unknown Unknown Unknown
libmpich.so.1.0 00002ADEFEA109DC Unknown Unknown Unknown
dynmat.x 000000000042E993 mp_synchronize_ 37
mp_base.f90
dynmat.x 000000000042EA12 bcast_integer_ 112
mp_base.f90
dynmat.x 000000000041B307 mp_mp_mp_bcast_i1 295 mp.f90
dynmat.x 0000000000415BC5 io_dyn_mat_mp_rea 259
io_dyn_mat.f90
dynmat.x 0000000000407691 MAIN__ 129
dynmat.f90
dynmat.x 0000000000406A0C Unknown Unknown Unknown
libc.so.6 00002ADEFF9CD994 Unknown Unknown Unknown
dynmat.x 0000000000406919 Unknown Unknown Unknown
MPI process terminated unexpectedly
error: executing task of job 220258 failed: execution daemon on host ...
didn't accept task
DONE
----------------
In *.out there is only: Reading Dynamical Matrix from file ch4.dyn.xml
Therefore it stops before writing: Acoustic Sum Rule: || Z*(ASR) -
Z*(orig)|| = ...
Thank you for any help.
--
Goranka Bilalbegovic,
Department of Physics, Faculty of Science,
University of Zagreb, Croatia
-------------- next part --------------
An HTML attachment was scrubbed...
URL: http://www.democritos.it/pipermail/pw_forum/attachments/20120111/8e804064/attachment.htm
More information about the Pw_forum
mailing list