[Pw_forum] Bug in NEB calculation with hybrid functionals
hannu.komsa at epfl.ch
hannu.komsa at epfl.ch
Wed Apr 20 12:50:11 CEST 2011
Hi
I am trying to do a NEB-calculation using hybrid functionals (HSE).
The first calculation, the first image, is calculated fine, but when
starting the second image, QE crashed with the following error message:
At line 228 of file exx.f90
Fortran runtime error: Attempting to allocate already allocated array
'index_xkq'
This line reads as:
allocate ( index_xkq(nkstot,nqs) )
I could just add if(.not.allocated()) etc.. However, even with this,
if the images have different number of k-points the calculation will
end with a segmentation fault. So I guess it would be better to
deallocate the arrays somewhere, but I don't know how to do this the
best way.
The error was reproduced with intel and gnu compiler, with 4.3 and CVS
version, and run in parallel or serial. Input file demonstrating the
bug for an unrealistic system included below.
Best regards,
Hannu-Pekka Komsa
EPFL, Switzerland
BEGIN
BEGIN_PATH_INPUT
&path
restart_mode = 'from_scratch'
string_method = 'neb',
nstep_path = 20,
ds = 2.D0,
opt_scheme = "broyden",
num_of_images = 5,
/
END_PATH_INPUT
BEGIN_ENGINE_INPUT
&control
prefix='Si',
pseudo_dir = './',
outdir='./'
/
&system
ibrav= 1, A = 5.465 , nat= 8, ntyp= 1,
ecutwfc = 20, nbnd =20,
input_dft='hse', nqx1 = 1, nqx2 = 1, nqx3 = 1,
exx_fraction = 0.25,
/
&electrons
conv_thr = 1e-5,
/
ATOMIC_SPECIES
Si 28.086 Si.pbe-rrkj.UPF
BEGIN_POSITIONS
FIRST_IMAGE
ATOMIC_POSITIONS crystal
Si 0.00 0.00 0.00 0 0 0
Si 0.50 0.50 0.00 0 0 0
Si 0.00 0.50 0.50 0 0 0
Si 0.50 0.00 0.50 0 0 0
Si 0.25 0.25 0.25
Si 0.75 0.75 0.25 0 0 0
Si 0.25 0.75 0.75 0 0 0
Si 0.75 0.25 0.75 0 0 0
LAST_IMAGE
ATOMIC_POSITIONS crystal
Si 0.000000000 0.000000000 0.000000000 0 0 0
Si 0.500000000 0.500000000 0.000000000 0 0 0
Si 0.000000000 0.500000000 0.500000000 0 0 0
Si 0.500000000 0.000000000 0.500000000 0 0 0
Si 0.386058672 0.386058672 0.386058672
Si 0.750000000 0.750000000 0.250000000 0 0 0
Si 0.250000000 0.750000000 0.750000000 0 0 0
Si 0.750000000 0.250000000 0.750000000 0 0 0
END_POSITIONS
K_POINTS automatic
2 2 2 1 1 1
END_ENGINE_INPUT
END
More information about the Pw_forum
mailing list