[Pw_forum] Problem in energy conservation in NVE MD using cp.x
SAKUMA Hiroshi
sakuma.h.aa at m.titech.ac.jp
Thu Jul 16 00:47:29 CEST 2009
Dear Nicola,
Thanks for your kind explanation.
I will use the working version from the cvs and the new release of the code.
Best regards,
hiroshi
-
Department of Earth & Planetary Sciences
Graduate School of Science & Engineering
Tokyo Institute of Technology
2-12-1 Ookayama Meguro-ku Tokyo 1528551
Kawamura Lab.
Tel: +81-3-5734-2617
Nicola wrote:
>Dear Hiroshi,
>thanks again for your observations - it turns out that in recent times
>(years) a small modification had arisen in the way the center of mass
>is treated that gave rise (in the very exotic case that you have been
>looking at) to the observed behavior. Roberto Car and his group
>(Federico Zipoli and Zhaofeng Li) has also noticed this a few months
>ago, but it has percolated back into the code just now.
>You can download the working version from the cvs, with these two >commands:
>cvs -d :pserver:anonymous at scm.qe-forge.org <http://www.democritos.it/mailman/listinfo/pw_forum>:/cvsroot/q-e login
>cvs -d :pserver:anonymous at scm.qe-forge.org <http://www.democritos.it/mailman/listinfo/pw_forum>:/cvsroot/q-e checkout >espresso
>or wait for a few days for the new release of the code, coinciding
>with the Santa Barbara school.
>If you apply it to your example, you'll notice that the constant
>of motion of the CP lagrangian is perfectly conserved, the physical
>constant of motion is very well conserved (as it should be), and also
>that after a fraction of a ps the water molecule will take up some
>kinetic energy (average around 10K, i.e. osciallting between 0 and 20K)
>due to the transfer of momentum between the fictitious system and the
>physical one. This is normal, and the relatively large amount is due to
>this very unusual case, using on top a lot of plane waves. It would be
>negligible in any large system.
>All the best,
> nicola
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