[Pw_forum] Problem in Ionic relaxation and MD runs
Holger Hesske
holger.hesske at chem.ethz.ch
Wed May 28 10:39:55 CEST 2008
Dear pwscf-users, -developers and other readers,
Currently I calculate BaO bulk (and surface) systems. Therefore I use a
testsystem with a cubic unitcell containing 8 atoms. Varying the cell length
continously (in separate scf calculations (5.00-6.00 Angstrom)) gives a
minimum at 5.460 Angstrom, which is 1.1% less then expt. X-ray data and
therfore acceptable (or not?). Btw: a reference stated BaO cell length with
PBE functional to be 5.59
One of my input files is given below:
&control
calculation='scf'
restart_mode='from_scratch',
pseudo_dir = '/cluster/home/chab/hesskeh/pseudo',
outdir='/cluster/work/chab/hesskeh/BaO_bulk/CELL_ABC_USPP',
disk_io = 'high',
/
&system
ibrav = 0,
A = 5.400,
B = 5.400,
C = 5.400,
cosAB = 0, cosAC = 0, cosBC = 0,
nat = 8, ntyp = 2,
ecutwfc = 50, ecutrho = 400,
/
&electrons
conv_thr = 1.0d-8,
mixing_beta = 0.7,
startingwfc= 'atomic+random',
/
CELL_PARAMETERS
1.000 0.000 0.000
0.000 1.000 0.000
0.000 0.000 1.000
ATOMIC_SPECIES
Ba 137.427 Ba.pbe-nsp-van.UPF
O 16.000 O.pbe-van_ak.UPF
ATOMIC_POSITIONS
Ba 0.000 0.000 0.000
Ba 0.500 0.500 0.000
Ba 0.500 0.000 0.500
Ba 0.000 0.500 0.500
O 0.500 0.000 0.000
O 0.000 0.500 0.000
O 0.000 0.000 0.500
O 0.500 0.500 0.500
K_POINTS automatic
5 5 5 0 0 0
so far so good. Moving on to ionic relaxation (nosym =.true ,
remove_rigid_rot=.true. ) :
(1) Starting from ideal atomic positions the forces where below 3.4D-6 (which
is expected)
(2) Distortion of one O-atom (O8) from {0.5 0.5 0.5} to {0.45 0.5 0.5} led to
force on O8 pointing to -x 0 0, so the distance between Ba and O will be
further decrease? (No ionic movement with the default forc_conv_thr)
(3) Reducing forc_conv_thr to 1D-4 led to movement of ions but it seems not to
converge. (I stopped the calculation after 100 steps of bfgs or damped
dynamics and the position of the atoms seemed to be similar and not very
different (+-0.002 crystal coordinates) from starting positions)
(4) Distortion of O8 to {0.25 0.5 0.5} or {0.75 0.5 0.5} led in the first step
of bfgs to a force on the atom pointing to the "right" positions but from the
second bfgs step the force on O8 is again the "wrong" direction (see below).
The calculation did not converge and O8 move +-0.02 around its starting
positions
BFGS (1 Step)
atom 1 type 1 force = -0.00099130 -0.00000711 -0.00000713
atom 2 type 1 force = -0.00364813 0.00000905 0.00000915
atom 3 type 1 force = -0.00364847 0.00000904 0.00000910
atom 4 type 1 force = -0.48689518 -0.00000708 -0.00000718
atom 5 type 2 force = -0.00003749 0.00000905 0.00000911
atom 6 type 2 force = 0.00461601 -0.00000709 -0.00000715
atom 7 type 2 force = 0.00461686 -0.00000710 -0.00000714
atom 8 type 2 force = 0.48598771 0.00000122 0.00000124
Total force = 0.687983 Total SCF correction = 0.000091
ATOMIC_POSITIONS (after 1 Step)
Ba -0.000033151 -0.000000237 -0.000000502
Ba 0.499743037 0.500000638 0.00000644
Ba 0.499743013 0.00000637 0.500000641
Ba -0.034295409 0.499999501 0.499999495
O 0.499997359 0.000000638 0.000000642
O 0.000325137 0.499999501 -0.000000504
O 0.000325197 -0.000000500 0.499999497
O 0.284231490 0.500000086 0.500000088
BFGS (2 Step)
atom 1 type 1 force = 0.01415644 -0.00216324 -0.00216320
atom 2 type 1 force = -0.03044379 0.00262967 0.00263000
atom 3 type 1 force = -0.03044377 0.00263004 0.00262963
atom 4 type 1 force = 0.14450759 -0.00226772 -0.00226767
atom 5 type 2 force = 0.00932027 0.00263080 0.00263076
atom 6 type 2 force = -0.01123409 -0.00216209 -0.00216194
atom 7 type 2 force = -0.01123442 -0.00216198 -0.00216206
atom 8 type 2 force = -0.08462822 0.00086451 0.00086449
Total force = 0.174697 Total SCF correction = 0.000033
The question arises: where is the failure or what did I wrong? Or even better:
what should I do to get a working relaxation?
(Caused by these confusing results I calculate scf's of the BaO cell with
2.6-2.8 angstrom cell length and the total energy was even lower than
the "minimum" at 5.46)
Maybe with the answer of the question above the next part might be unimportant
or useless. But: Starting md's from ideal atomic positions (with and without
temp rescaling, dt ={2, 5, 10, 15, 20}) it always ended up finally with pairs
of BaO having a interatomic distance below 1.3 Angstrom! I guess it is the
same problem...
Thanks for reading the complete text and in advance for every hint I get.
best regards
Holger Hesske
PS. I could provide a lot of input and output files but i dont want to waste
the time of the readers, in case I made a simple (stupid) mistake in setting
up the calculations.
--
Dr. Holger Hesske
Inst.f.Chemie-/Bioingenieurwissenschaft.
Wolfgang-Pauli-Str. 10
ETH Hönggerberg, HCI E 133
CH-8093 Zürich
Tel: +41 44 633 66 19
Fax: +41 44 632 11 63
E-Mail: holger.hesske at chem.ethz.ch
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