[Pw_forum] compile error on Xeon with intel fortran
Axel Kohlmeyer
akohlmey at cmm.chem.upenn.edu
Sat Apr 5 15:27:03 CEST 2008
On Sat, 5 Apr 2008, Min Seung Kyu wrote:
MSK> Dear users and developers,
dear min,
MSK> I compiled espresso3.2.3 on Xeon machine with Intel fortran 10.1.012 and
MSK>
MSK> MKL 10.0.1.014 version. Whenever I run pw.x, however, I get segementation
what linux version and which release? which type of xeon cpu
(check out /proc/cpuinfo)? are you running 32-bit mode or x86_64?
MSK> fault message at the beginning.
check out the usual recommendations with intel:
- increase stack size limit.
- disable MKL threads with setting the environment
variable OMP_NUM_THREADS to 1. (as of version 10
MKL always tries to run multiple threads on multi
cpu/core machines, regardless whether you also
are running MPI or just don't want it)
- try compiling with reduced optimization.
MSK> Program PWSCF v.3.2.3 starts ...
MSK> Today is 4Apr2008 at 21:35:35
MSK>
MSK> Ultrasoft (Vanderbilt) Pseudopotentials
MSK>
MSK> Current dimensions of program pwscf are:
MSK>
MSK> ntypx = 10 npk = 40000 lmax = 3
MSK> nchix = 6 ndmx = 2000 nbrx = 14 nqfx = 8
MSK> forrtl: severe (174): SIGSEGV, segmentation fault occurred
MSK> Image PC Routine Line Source
MSK> pw.x 0000000000DF55B7 Unknown Unknown Unknown
MSK> libpthread.so.0 0000003A0550C4F0 Unknown Unknown Unknown
MSK> pw.x 0000000000DF5593 Unknown Unknown Unknown
MSK> libpthread.so.0 0000003A0550C4F0 Unknown Unknown Unknown
MSK>
MSK> My maks.sys file contains
MSK>
MSK> BLAS_LIBS = -L/opt/intel/mkl/10.0.1.014/lib/em64t -lmkl_em64t -lmkl_core -lguide -lpthread
where are the rest of the settings? they matter as much as
the BLAS lib. what makes you think that MKL is the culprit?
MSK>
MSK> Please let me know what I should do.
the most important thing you should do is to report problems
in a way, that somebody can reproduce it. you provide some
information, but it is not complete...
cheers,
axel.
MSK> Sincerely, Min.
MSK>
MSK>
MSK>
MSK>
MSK> _______________________________________________
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MSK> Pw_forum at pwscf.org
MSK> http://www.democritos.it/mailman/listinfo/pw_forum
MSK>
--
=======================================================================
Axel Kohlmeyer akohlmey at cmm.chem.upenn.edu http://www.cmm.upenn.edu
Center for Molecular Modeling -- University of Pennsylvania
Department of Chemistry, 231 S.34th Street, Philadelphia, PA 19104-6323
tel: 1-215-898-1582, fax: 1-215-573-6233, office-tel: 1-215-898-5425
=======================================================================
If you make something idiot-proof, the universe creates a better idiot.
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